FEBS Letters
Volume 514, Issue 1 , Pages 60-66 , 6 March 2002

Transit of tRNA through the Escherichia coli ribosome: cross-linking of the 3′ end of tRNA to ribosomal proteins at the P and E sites

Edited by Lev Kisselev

  • Stanislav V Kirillov

      Affiliations

    • Department of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, MA 01003, USA
  • ,
  • Jacek Wower

      Affiliations

    • Department of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, MA 01003, USA
  • ,
  • Stephen S Hixson

      Affiliations

    • Department of Chemistry, University of Massachusetts, Amherst, MA 01003, USA
  • ,
  • Robert A Zimmermann

      Affiliations

    • Department of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, MA 01003, USA
    • Corresponding Author InformationCorresponding author. Fax: (1)-413-545-3921

Received 7 November 2001 ,Accepted 14 November 2001.

References 

  1. Wower J, Wower IK, Kirillov S, Rosen K, Hixson SS, Zimmermann RA. Biochem. Cell Biol. 1995;73:1041–1047
  2. Kirillov SV, Porse BT, Vester B, Wooley P, Garrett RA. FEBS Lett. 1997;406:223–233
  3. Wower J, Kirillov SV, Wower I, Guven S, Hixson SS, Zimmermann RA. J. Biol. Chem. 2000;275:37887–37894
  4. Nekhai SA, Parfenov DV, Saminsky EM. Biochim. Biophys. Acta. 1994;1218:481–484
  5. Lill R, Robertson JM, Wintermeyer W. Biochemistry. 1984;23:6710–6717
  6. Kirillov SV, Semenkov YuP. J. Biomol. Struct. Dyn. 1986;4:263–269
  7. Lill R, Lepier A, Schwagele F, Sprinzl M, Vogt H, Wintermeyer W. J. Mol. Biol. 1988;203:699–705
  8. Vladimirov SN, Graifer DM, Zenkova MA, Karpova GG, Olenina LV, Kirillov SV, et al. Biopolym. Cell. 1989;5:35–40
  9. Wower J, Scheffer P, Sylvers LA, Wintermeyer W, Zimmermann RA. EMBO J. 1993;12:617–623
  10. Yusupov MM, Yusupova GZh, Baucom A, Lieberman K, Earnest TN, Cate JHD, et al. Science. 2001;292:883–896
  11. Yusupova GZh, Yusupov MM, Cate JHD, Noller HF. Cell. 2001;106:233–241
  12. Agrawal RK, Penczek P, Grassucci RA, Li Y, Leith A, Nierhaus KH, et al. Science. 1996;271:1000–1002
  13. Stark H, Orlova EV, Rinke-Appel J, Junke N, Mueller F, Rodnina M, et al. Cell. 1997;88:19–28
  14. Moazed D, Noller H. Nature (London). 1989;342:142–148
  15. Noller, H.F., Moazed, D., Stern, S., Powers, T., Allen, P.N., Robertson, J.M., Weiser, B. and Triman, K. (1990) in: The Ribosome: Structure, Function and Evolution (Hill, W., Dahlberg, A., Garrett, R.A., Moore, P.B., Schlessinger, D. and Warner, J.R., Eds.), pp. 73–92, American Society for Microbiology, Washington, DC.
  16. Wower, J., Sylvers, L.A., Rosen, K.V., Hixson, S.S. and Zimmermann, R.A. (1993) in: The Translational Apparatus (Nierhaus, K.H., Franceschi, F., Subramanian, A.R., Erdmann, V.A. and Wittmann-Liebold, B., Eds.), pp. 455–464, Plenum, New York.
  17. Sylvers LA, Kopylov AM, Wower J, Hixson SS, Zimmermann RA. Biochimie. 1992;74:381–389
  18. Wower J, Zimmermann RA. Biochimie. 1991;73:961–969
  19. Frank J. J. Struct. Biol. 1998;124:142–150
  20. Agrawal RK, Spahn CMT, Penczek P, Grassuci RA, Nierhaus KH, Frank J. J. Cell Biol. 2000;150:447–459
  21. Semenkov YuP, Shapkina TG, Kirillov SV. FEBS Lett. 1992;296:207–210
  22. Sylvers LA, Wower J, Hixson SS, Zimmermann RA. FEBS Lett. 1989;245:9–13
  23. Wower J, Hixson SS, Zimmermann RA. Biochemistry. 1988;27:8114–8121
  24. Rappaport S, Lapidot Y. Methods Enzymol. 1974;29:685–688
  25. Litt M. Biochem. Biophys. Res. Commun. 1968;32:507–511
  26. Makhno VI, Peshin NN, Semenkov YuP, Kirillov SV. Mol. Biol. 1988;22:528–536
  27. Kirillov SV, Makhno VI, Semenkov YuP. Eur. J. Biochem. 1978;89:297–304
  28. Brimacombe, R., Greuer, B., Gulle, H., Kosack, M., Mitchel, P., Osswald, M., Stade, K. and Stiege, W. (1990) in: Ribosomes and Protein Synthesis. A Practical Approach (Spedding, G., Ed.), pp. 131–159, Oxford University Press, Oxford.
  29. Wower J, Hixson SS, Zimmermann RA. Proc. Natl. Acad. Sci. USA. 1989;86:5232–5236
  30. Rheinberger H-J, Sternbach H, Nierhaus KH. Proc. Natl. Acad. Sci. USA. 1981;78:5310–5314
  31. Grajevskaja RA, Ivanov YuV, Saminsky EM. Eur. J. Biochem. 1982;128:47–52
  32. Kirillov SV, Makarov EM, Semenkov YuP. FEBS Lett. 1983;157:91–94
  33. Odinzov VB, Kirillov SV. Nucleic Acids Res. 1978;5:3871–3879
  34. Lill R, Robertson JM, Wintermeyer W. Biochemistry. 1986;25:3245–3255
  35. Lill R, Wintermeyer W. J. Mol. Biol. 1987;196:137–148
  36. Makarov EM, Katunin VI, Odintsov VB, Semenkov YuP, Kirillov SV. Mol. Biol. 1984;18:11090–11094
  37. Kirillov SV, Semenkov YuP. FEBS Lett. 1982;148:235–238
  38. Wintermeyer, W., Lill, R. and Robertson, J.M. (1990) in: The Ribosome: Structure, Function and Evolution (Hill, W., Dahlberg, A., Garrett, R.A., Moore, P.B., Schlessinger, D. and Warner, J.R., Eds.), pp. 348–357, American Society for Microbiology, Washington, DC.
  39. Szer W, Kurilo-Borovska Z. Biochim. Biophys. Acta. 1972;259:357–368
  40. Watanabe S. J. Mol. Biol. 1972;67:443–449
  41. Parfenov DV, Saminskii EM. Mol. Biol. 1993;27:507–510
  42. Wimberly BT, Brodersen DE, Clemons WM, Morgan-Warren RJ, Carter AP, Vonrhein C, et al. Nature. 2000;407:327–339
  43. Schluenzen F, Tocilj A, Zarivach R, Harms J, Gluehmann M, Janell D, et al. Cell. 2000;102:615–623
  44. Ban N, Nissen P, Hansen J, Moore PB, Steitz TA. Science. 2000;289:905–919
  45. Barta A, Steiner G, Brosius J, Noller HF, Kuechler E. Proc. Natl. Acad. Sci. USA. 1984;81:3607–3611
  46. Moazed D, Noller H. Cell. 1989;57:585–597
  47. Lieberman KR, Dahlberg AE. J. Biol. Chem. 1994;269:16163–16169
  48. Samaha RR, Green R, Noller HF. Nature. 1995;377:309–314
  49. Porse BT, Thi-Ngoc HP, Garrett RA. J. Mol. Biol. 1996;264:472–483
  50. Kirillov SV, Porse BT, Garrett RA. RNA. 1999;5:1003–1013
  51. Nissen P, Hansen J, Ban N, Moore PB, Steitz TA. Science. 2000;289:878–879
  52. Wower J, Wower I, Zwieb C. Nucleic Acids Symp. 1999;41:187–191

PII: S0014-5793(02)02302-5

FEBS Letters
Volume 514, Issue 1 , Pages 60-66 , 6 March 2002