FEBS Letters
Volume 514, Issue 1 , Pages 17-25 , 6 March 2002

Ribosomal RNA pseudouridines and pseudouridine synthases

Edited by Lev Kisselev

Received 20 November 2001 ,Accepted 27 November 2001.

References 

  1. Maden BEH. Progr. Nucleic Acid Res. Mol. Biol. 1990;39:241–300
  2. Johnson L, Söll D. Proc. Natl. Acad. Sci. USA. 1970;67:943–950
  3. Ciampi MS, Arena F, Cortese R, Daniel V. FEBS Lett. 1977;77:75–82
  4. Huang L, Pookanjanatavip M, Gu X, Santi DV. Biochemistry. 1998;37:344–351
  5. Gu X, Liu Y, Santi DV. Proc. Natl. Acad. Sci. USA. 1999;96:14270–14275
  6. Foster PG, Huang L, Santi DV, Stroud RM. Nature Struct. Biol. 2000;7:23–27
  7. Ofengand, J. and Fournier, M. (1998) in: Modification and Editing of RNA (Grosjean, H. and Benne, R., Eds.), pp. 229–253, ASM Press, Washington, DC.
  8. Bachellerie, J.-P., Cavaille, J. and Qu, L.H. (2000) in: The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions (Garrett, R.A., Douthwaite, S.R., Liljas, A., Matheson, A.T., Moore, P.B. and Noller, H.F., Eds.), pp. 191–203, ASM Press, Washington, DC.
  9. Kiss T. EMBO J. 2001;20:3617–3622
  10. Bakin A, Kowalak JA, McCloskey JA, Ofengand J. Nucleic Acids Res. 1994;22:3681–3684
  11. Niu L, Ofengand J. Biochemistry. 1999;38:629–635
  12. Bakin A, Ofengand J. Nucleic Acids Res. 1995;23:3290–3294
  13. Kowalak JA, Bruenger E, Crane P, McCloskey JA. J. Biol. Chem. 2000;275:24484–24489
  14. Noon KR, Bruenger E, McCloskey JA. J. Bacteriol. 1998;180:2883–2888
  15. Bakin A, Ofengand J. Biochemistry. 1993;32:9754–9762
  16. Ofengand J, Bakin A. J. Mol. Biol. 1997;266:246–268
  17. Massenet S, Ansmant I, Motorin Y, Branlant C. FEBS Lett. 1999;462:94–100
  18. Bakin A, Lane BG, Ofengand J. Biochemistry. 1994;33:13475–13483
  19. Rubin GM. J. Biol. Chem. 1973;248:3860–3875
  20. Nazar RN, Sitz TO, Busch H. Biochemistry. 1976;15:505–508
  21. Khan MSN, Maden BEH. Nucleic Acids Res. 1977;4:2495–2505
  22. Ofengand, J., Malhotra, A., Remme, J., Gutgsell, N., Del Campo, M., Jean-Charles, S., Peil, L. and Kaya, Y. (2001) Cold Spring Harbor Symp. Quant. Biol. 66, in press.
  23. Kowalak JA, Bruenger E, Hashizume T, Peltier JM, Ofengand J, McCloskey JA. Nucleic Acids Res. 1996;24:688–693
  24. Yusupov MM, Yusupova GZ, Baucom A, Lieberman K, Earnest TN, Cate JH, et al. Science. 2001;292:883–896
  25. Ban N, Nissen P, Hansen J, Moore PB, Steitz TA. Science. 2000;289:905–920
  26. Wrzesinski J, Bakin A, Nurse K, Lane B, Ofengand J. Biochemistry. 1995;34:8904–8913
  27. Conrad J, Niu L, Rudd K, Lane BG, Ofengand J. RNA. 1999;5:751–763
  28. Del Campo, M., Kaya, Y. and Ofengand, J. (2001) RNA 7, in press.
  29. Wrzesinski J, Nurse K, Bakin A, Lane BG, Ofengand J. RNA. 1995;1:437–448
  30. Raychaudhuri S, Niu L, Conrad J, Lane BG, Ofengand J. J. Biol. Chem. 1999;274:18880–18886
  31. Ramamurthy V, Swann SL, Paulson JL, Spedaliere CJ, Mueller EG. J. Biol. Chem. 1999;274:22225–22230
  32. Conrad J, Sun D, Englund N, Ofengand J. J. Biol. Chem. 1998;273:18562–18566
  33. Huang L, Ku J, Pookanjanatavip M, Gu X, Wang D, Greene PJ, et al. Biochemistry. 1998;37:15951–15957
  34. Raychaudhuri S, Conrad J, Hall BG, Ofengand J. RNA. 1998;4:1407–1417
  35. Gutgsell NS, Del Campo M, Raychaudhuri S, Ofengand J. RNA. 2001;7:990–998
  36. Nurse K, Wrzesinski J, Bakin A, Lane BG, Ofengand J. RNA. 1995;1:102–112
  37. Gutgsell N, Englund N, Niu L, Kaya Y, Lane BG, Ofengand J. RNA. 2000;6:1870–1881
  38. Arps PJ, Marvel CC, Rubin BC, Tolan DA, Penhoet EE, Winkler ME. Nucleic Acids Res. 1985;13:5297–5315
  39. Kammen HO, Marvel CC, Hardy L, Penhoet EE. J. Biol. Chem. 1988;263:2255–2263
  40. Koonin EV. Nucleic Acids Res. 1996;24:2411–2415
  41. Gustafsson C, Reid R, Greene PJ, Santi DV. Nucleic Acids Res. 1996;24:3756–3762
  42. Ofengand, J. and Rudd, K. (2000) in: The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions (Garrett, R.A., Douthwaite, S.R., Liljas, A., Matheson, A.T., Moore, P.B. and Noller, H.F., Eds.), pp. 175–189, ASM Press, Washington, DC.
  43. Ansmant I, Motorin Y, Massenet S, Grosjean H, Branlant C. J. Biol. Chem. 2001;276:34934–34940
  44. Ansmant I, Massenet S, Grosjean H, Motorin Y, Branlant C. Nucleic Acids Res. 2000;28:1941–1946
  45. Zebarjadian Y, King T, Fournier MJ, Clarke L, Carbon J. Mol. Cell. Biol. 1999;19:7461–7472
  46. Liang X, Liu L, Michaeli S. J. Biol. Chem. 2001;276:40313–40316
  47. Ng WA, Kennedy SP, Mahairas GG, Berquist B, Pan M, et al.  Proc. Natl. Acad. Sci. USA. 2000;97:12176–12181
  48. Henras A, Henry Y, Bousquet-Antonelli C, Noaillac-Depeyre J, Gélugne J-P, Caizergues-Ferrer M. EMBO J. 1998;17:7078–7090
  49. Watanabe Y, Gray MW. Nucleic Acids Res. 2000;28:2342–2352

PII: S0014-5793(02)02305-0

FEBS Letters
Volume 514, Issue 1 , Pages 17-25 , 6 March 2002