FEBS Letters
Volume 582, Issue 8 , Pages 1245-1250, 9 April 2008

A molecular interpretation of genetic interactions in yeast

Edited by Robert B. Russell

  • Amelie Stein

      Affiliations

    • Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Center (BSC), c/Josep Samitier 1-5, 08028 Barcelona, Spain
  • ,
  • Patrick Aloy

      Affiliations

    • Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Center (BSC), c/Josep Samitier 1-5, 08028 Barcelona, Spain
    • Institució Catalana de Recerca i Estudis Avançats (ICREA), Spain
    • Corresponding Author InformationCorresponding author. Address: Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Center (BSC), c/Josep Samitier 1-5, 08028 Barcelona, Spain. Fax: +34 934039954.

Received 22 January 2008; accepted 8 February 2008. published online 18 February 2008.

Abstract 

Gene deletion studies in yeast have shown that only ∼18% of its genes are essential for survival under standard laboratory conditions. This unexpectedly high fraction of genes with apparently no deletion effect has many practical and fundamental implications, and it is subject of considerable interest. Here, we briefly review some of the complementary models proposed to explain the robustness observed in biological networks. We also present and analyse a collection of well-documented cases of gene pairs with capacity to compensate the deleterious effects caused by the inactivation of one of the partner genes, and suggest the molecular bases of how these functional compensations might occur at the protein level.

Keywords: Genetic interaction, Synthetic lethal, Network robustness, Gene duplicate, Pathway redundancy

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PII: S0014-5793(08)00125-7

doi:10.1016/j.febslet.2008.02.020

FEBS Letters
Volume 582, Issue 8 , Pages 1245-1250, 9 April 2008