FEBS Letters
Volume 583, Issue 7 , Pages 1090-1095, 2 April 2009

Association of the eukaryotic V1VO ATPase subunits a with d and d with A

School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Republic of Singapore

Received 23 January 2009; received in revised form 4 March 2009; accepted 5 March 2009. published online 16 March 2009.

Edited by Peter Brzezinski

Abstract 

Owing to the complex nature of V1VO ATPases, identification of neighboring subunits is essential for mechanistic understanding of this enzyme. Here, we describe the links between the V1 headpiece and the VO-domain of the yeast V1VO ATPase via subunit A and d as well as the VO subunits a and d using surface plasmon resonance and fluorescence correlation spectroscopy. Binding constants of about 60 and 200nM have been determined for the ad and d–A assembly, respectively. The data are discussed in light of subunit a and d forming a peripheral stalk, connecting the catalytic A3B3 hexamer with VO.

Structured summary

MINT-7012054: d (uniprotkb:P32366) binds (MI:0407) to A (uniprotkb:P17255) by fluorescence correlation spectroscopy (MI:0052)

MINT-7012041: d (uniprotkb:P32366) binds (MI:0407) to A (uniprotkb:P17255) by surface plasmon resonance (MI:0107)

MINT-7012028: d (uniprotkb:P32366) binds (MI:0407) to a (uniprotkb:P32563) by surface plasmon resonance (MI:0107)

Abbreviations: DTT, dithiothreitol, FCS, fluorescence correlation spectroscopy, IPTG, isopropyl-β-d-thio-galactoside, NBD-Cl, 7-chloro-4-nitrobenzo-2-oxa-1,3-diazole, NHR, non-homologous region, NTA, nitrilotriacetic acid, PAGE, polyacrylamide gel electrophoresis, PCR, polymerase chain reaction, SAXS, small angle X-ray scattering, SDS, sodium dodecyl sulfate, SPR, surface plasmon resonance, TMR, tetramethylrhodamin, Tris, Tris-(hydroxymethyl) aminomethane

Keywords: Vacuolar-type ATPase, V1VO ATPase, Subunit a, Subunit d, Subunit A, Surface plasmon resonance, NBD-Cl

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PII: S0014-5793(09)00189-6

doi:10.1016/j.febslet.2009.03.013

FEBS Letters
Volume 583, Issue 7 , Pages 1090-1095, 2 April 2009